Jiyi

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  • in reply to: BOMB protocol #9.1 Bisulfite conversion #8857
    Jiyi
    Participant

      Hi Michael,

      Thanks for your reply, I repeat my experiment several time as keeping  beads on the magnet at the wash steps. The recovery raised to 20%, which is still low to me.

      I am wondering that maybe the key problem is my beads.  I will update my progress if there are some good news.

      Best,

      Ji

       

      in reply to: BOMB protocol #9.1 Bisulfite conversion #8854
      Jiyi
      Participant

        hi everyone,

        Is your recovery rate higher than 50%? My recovery is only 10% when I followed the protocol. Only difference is the silica-coated magnetic beads. I purchased the beads from other company. Its concentration is 50mg/ul and the size is 100nm.

        The recovery of the EZ DNA methylation MagPrep kit(Zymo) is about 50-70%.

        Best,

        Ji

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