Timon

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  • in reply to: BOMB protocol #4.3 Gel extraction #9598
    Timon
    Participant

      Is there any update on how to avoid these gel extraction issues? Thanks.

      Cheers,

      Timon

      in reply to: BOMB protocol #4.3 Gel extraction #9571
      Timon
      Participant

        Hello Tim, thanks for you response,

        I usually use 0.8% agarose gels, and try to dissolve 300mg of gel as a maximum for gel extraction. We tried to double the length of the gel dissolving step, but that did not prevent it. Neither did washing the carboxyl beads in advance, or heating the beadfilm in an attempt to dissolve remaining agarose. Hopefully your colleague has a solution!

        Cheers,

        Timon

         

        in reply to: BOMB protocol #4.3 Gel extraction #9563
        Timon
        Participant

          Hey Everyone,

          Our lab is really enjoying the beads, they work great. We have come across some issues when using them for gel extraction however. When we add isopropanol to the dissolved gel and the carboxylated beads we use, the beads tend to clump together. No vortexing, pipetting or even mechanical disruption tends to break the beads apart again at this point. The yield is next to zero because of this. Does anyone have experience with these issues?

          Thanks,

          Timon

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